Survival-associated meQTLs across different cancer types
We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs11594129 | chr10:88223991 | G/C | 5.8E-8 | 285 | 26.38 | 23.1 | 9.77 | KM Plot |
| KIRP | rs11595245 | chr10:88238056 | C/T | 5.8E-8 | 285 | 26.38 | 23.1 | 9.77 | KM Plot |
| KIRP | rs11597229 | chr10:124797523 | G/A | 2.1E-9 | 286 | 25.62 | 26.47 | 13.17 | KM Plot |
| KIRP | rs11599564 | chr10:124797965 | C/T | 2.1E-9 | 286 | 25.62 | 26.47 | 13.17 | KM Plot |
| KIRP | rs11599623 | chr10:88238243 | G/C | 5.8E-8 | 285 | 26.38 | 23.1 | 9.77 | KM Plot |
| KIRP | rs11599885 | chr10:124797507 | A/C | 0.000119 | 287 | 25.4 | 28.17 | 18.33 | KM Plot |
| KIRP | rs11609068 | chr12:49840480 | G/A | 4.71E-6 | 288 | 25.63 | 29.3 | 10.97 | KM Plot |
| KIRP | rs11609549 | chr12:49899635 | C/T | 5.84E-6 | 280 | 25.6 | 44.53 | 10.97 | KM Plot |
| KIRP | rs11610835 | chr12:49859318 | A/G | 4.13E-6 | 286 | 25.53 | 39.53 | 10.97 | KM Plot |
| KIRP | rs11613171 | chr12:49907515 | T/A | 5.89E-6 | 282 | 25.82 | 34.97 | 10.97 | KM Plot |
| KIRP | rs11613183 | chr12:49931730 | T/C | 4.19E-6 | 279 | 26 | 23.6 | 10.97 | KM Plot |
| KIRP | rs11615383 | chr12:49890143 | G/T | 4.13E-6 | 286 | 25.53 | 39.53 | 10.97 | KM Plot |
| KIRP | rs116192607 | chr10:43512561 | C/T | 2.84E-6 | 285 | 25.63 | 26.52 | 16.12 | KM Plot |
| KIRP | rs116286059 | chr3:16502867 | C/T | 9.51E-5 | 289 | 25.62 | 45.47 | 9.35 | KM Plot |
| KIRP | rs11631051 | chr15:42102579 | T/A | 0.000189 | 284 | 26.7 | 24.3 | 16.53 | KM Plot |